Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm23604-201ENSMUST00000104311 132 ntBASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Gm43852-201ENSMUST00000202098 917 ntBASIC10.16□□□□□ -0.78
Smg1Q8BKX6 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Map1b-203ENSMUST00000223725 2669 ntBASIC10.16□□□□□ -0.78
Smg1Q8BKX6 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Gm13171-201ENSMUST00000117233 391 ntBASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Gm27675-201ENSMUST00000184527 94 ntBASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Gm6304-201ENSMUST00000096579 447 ntBASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Gm10169-201ENSMUST00000121822 348 ntBASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Gm9797-202ENSMUST00000218003 294 ntBASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smg1Q8BKX6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smg1Q8BKX6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smg1Q8BKX6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smg1Q8BKX6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Smg1Q8BKX6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smg1Q8BKX6 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smg1Q8BKX6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.15□□□□□ -0.79
Smg1Q8BKX6 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm17192-201ENSMUST00000169031 511 ntBASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm24809-201ENSMUST00000175318 271 ntBASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm26957-201ENSMUST00000182645 977 ntBASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.14□□□□□ -0.79
Smg1Q8BKX6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms