Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm11222-201ENSMUST00000119005 738 ntBASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm38341-201ENSMUST00000195357 515 ntBASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm44364-201ENSMUST00000198368 141 ntBASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm43758-201ENSMUST00000199500 367 ntBASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm21769-201ENSMUST00000211922 111 ntBASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Srrm4Q8BKA3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Gm11531-201ENSMUST00000117614 555 ntBASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Gm7783-201ENSMUST00000204795 781 ntBASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Srrm4Q8BKA3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Gm13315-201ENSMUST00000120376 991 ntBASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Gm11597-201ENSMUST00000121423 964 ntBASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms