Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.28□□□□□ -0.28
Nop53Q8BK35 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nop53Q8BK35 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.28□□□□□ -0.28
Nop53Q8BK35 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.28□□□□□ -0.28
Nop53Q8BK35 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nop53Q8BK35 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nop53Q8BK35 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.27□□□□□ -0.29
Nop53Q8BK35 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Gm12384-201ENSMUST00000119228 919 ntBASIC13.27□□□□□ -0.29
Nop53Q8BK35 Gm14913-201ENSMUST00000120011 1093 ntBASIC13.27□□□□□ -0.29
Nop53Q8BK35 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.27□□□□□ -0.29
Nop53Q8BK35 Gm14760-201ENSMUST00000121831 999 ntBASIC13.27□□□□□ -0.29
Nop53Q8BK35 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Nop53Q8BK35 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.26□□□□□ -0.29
Nop53Q8BK35 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Snord83b-201ENSMUST00000104546 94 ntBASIC13.26□□□□□ -0.29
Nop53Q8BK35 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Gm16177-201ENSMUST00000120728 718 ntBASIC13.26□□□□□ -0.29
Nop53Q8BK35 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 AC159246.1-201ENSMUST00000214478 249 ntBASIC13.26□□□□□ -0.29
Nop53Q8BK35 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.26□□□□□ -0.29
Nop53Q8BK35 Daam2-202ENSMUST00000224595 1926 ntBASIC13.26□□□□□ -0.29
Nop53Q8BK35 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.26□□□□□ -0.29
Nop53Q8BK35 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nop53Q8BK35 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms