Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Rmrp-201ENSMUST00000157463 271 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm27892-201ENSMUST00000185017 106 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm38092-201ENSMUST00000195600 653 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Gm8227-201ENSMUST00000223306 571 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2bQ8BJF9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Gm7029-201ENSMUST00000173226 450 ntBASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms