Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm24255-201ENSMUST00000104481 128 ntBASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm15236-201ENSMUST00000117309 379 ntBASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm12502-201ENSMUST00000120197 444 ntBASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm8738-201ENSMUST00000172606 329 ntBASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Depdc1bQ8BH88 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Matn2-203ENSMUST00000226766 3252 ntBASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gm10434-201ENSMUST00000101158 471 ntBASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gm22323-201ENSMUST00000103832 109 ntBASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gm24231-201ENSMUST00000104315 133 ntBASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gm11222-201ENSMUST00000119005 738 ntBASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gm11964-201ENSMUST00000120982 444 ntBASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Depdc1bQ8BH88 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms