Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gm44397-201ENSMUST00000195950 113 ntBASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc5a7Q8BGY9 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm16296-201ENSMUST00000159905 325 ntBASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm2213-201ENSMUST00000197485 688 ntBASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm6983-201ENSMUST00000214912 628 ntBASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Gm8396-201ENSMUST00000057361 823 ntBASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc5a7Q8BGY9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms