Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Samm50Q8BGH2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Samm50Q8BGH2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Samm50Q8BGH2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.48□□□□□ -0.09
Samm50Q8BGH2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Gm8099-201ENSMUST00000200510 742 ntBASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.48□□□□□ -0.09
Samm50Q8BGH2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Samm50Q8BGH2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Gm22121-201ENSMUST00000175148 54 ntBASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Gm3890-201ENSMUST00000182416 207 ntBASIC14.47□□□□□ -0.09
Samm50Q8BGH2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.47□□□□□ -0.09
Samm50Q8BGH2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Olfr582-201ENSMUST00000098212 960 ntBASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.47□□□□□ -0.09
Samm50Q8BGH2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Samm50Q8BGH2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms