Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Usp6nlQ80XC3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Usp6nlQ80XC3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Usp6nlQ80XC3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Gm17391-201ENSMUST00000171036 126 ntBASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Mir6546-201ENSMUST00000184460 62 ntBASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.64□□□□□ -0.23
Usp6nlQ80XC3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm27530-201ENSMUST00000184096 98 ntBASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm43916-201ENSMUST00000205062 967 ntBASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm807-202ENSMUST00000224929 408 ntBASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Ginm1-202ENSMUST00000065124 300 ntBASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp6nlQ80XC3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms