Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gm13492-201ENSMUST00000119772 665 ntBASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gm14704-201ENSMUST00000120300 874 ntBASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gm15432-201ENSMUST00000121106 195 ntBASIC14.29□□□□□ -0.12
Prpf40bQ80W14 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gm17812-201ENSMUST00000204935 318 ntBASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Gm11434-201ENSMUST00000122379 629 ntBASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.28□□□□□ -0.12
Prpf40bQ80W14 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Gm7600-201ENSMUST00000209657 785 ntBASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40bQ80W14 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40bQ80W14 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.27□□□□□ -0.12
Prpf40bQ80W14 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.27□□□□□ -0.13
Prpf40bQ80W14 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40bQ80W14 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms