Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.43□□□□□ -0.42
Usp8Q80U87 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.42□□□□□ -0.42
Usp8Q80U87 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.42□□□□□ -0.42
Usp8Q80U87 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.42□□□□□ -0.42
Usp8Q80U87 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp8Q80U87 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Gm19163-201ENSMUST00000223313 780 ntBASIC12.42□□□□□ -0.42
Usp8Q80U87 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp8Q80U87 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Daam2-202ENSMUST00000224595 1926 ntBASIC12.42□□□□□ -0.42
Usp8Q80U87 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp8Q80U87 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp8Q80U87 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Usp8Q80U87 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Gm6091-201ENSMUST00000098307 165 ntBASIC12.41□□□□□ -0.42
Usp8Q80U87 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.41□□□□□ -0.42
Usp8Q80U87 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp8Q80U87 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Usp8Q80U87 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp8Q80U87 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp8Q80U87 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms