Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Gm14760-201ENSMUST00000121831 999 ntBASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.47□□□□□ -0.25
Ctdp1Q7TSG2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Gm24644-201ENSMUST00000157114 139 ntBASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Gm6091-201ENSMUST00000098307 165 ntBASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ctdp1Q7TSG2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ctdp1Q7TSG2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ctdp1Q7TSG2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms