Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm28251-201ENSMUST00000188835 695 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gm37318-201ENSMUST00000194325 695 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gm38017-201ENSMUST00000194768 695 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gm37287-201ENSMUST00000195449 695 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gm37793-201ENSMUST00000195548 695 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm16071-201ENSMUST00000119589 793 ntBASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm17826-201ENSMUST00000189720 798 ntBASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm45113-201ENSMUST00000207518 165 ntBASIC14.31□□□□□ -0.12
Nup98Q6PFD9 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm11956-201ENSMUST00000119525 512 ntBASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Gm7600-201ENSMUST00000209657 785 ntBASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup98Q6PFD9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Gm25076-201ENSMUST00000104098 132 ntBASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Gm7666-201ENSMUST00000146631 819 ntBASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Mir7076-201ENSMUST00000183519 74 ntBASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup98Q6PFD9 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms