Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mir6956-201ENSMUST00000183598 62 ntBASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Gm29667-201ENSMUST00000190817 490 ntBASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Gm9797-201ENSMUST00000052902 613 ntBASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.71□□□□□ -0.54
Rnf220Q6PDX6 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Mir8102-201ENSMUST00000184148 139 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm19931-201ENSMUST00000198920 368 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf220Q6PDX6 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms