Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.82□□□□□ -0.2
Usp49Q6P9L4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Gm24845-201ENSMUST00000158034 109 ntBASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Gm43179-201ENSMUST00000198797 275 ntBASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Gm10608-202ENSMUST00000213924 676 ntBASIC13.82□□□□□ -0.2
Usp49Q6P9L4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp49Q6P9L4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Olfr284-202ENSMUST00000206647 966 ntBASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Gm9257-201ENSMUST00000221254 232 ntBASIC13.81□□□□□ -0.2
Usp49Q6P9L4 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.81□□□□□ -0.2
Usp49Q6P9L4 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp49Q6P9L4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.8□□□□□ -0.2
Usp49Q6P9L4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Gm7046-201ENSMUST00000221351 977 ntBASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Morn2-202ENSMUST00000227729 656 ntBASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp49Q6P9L4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp49Q6P9L4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp49Q6P9L4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp49Q6P9L4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms