Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Gm11803-201ENSMUST00000119966 444 ntBASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Tpm4Q6IRU2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm14928-201ENSMUST00000120198 477 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm6244-201ENSMUST00000178732 841 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm10146-201ENSMUST00000072739 309 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tpm4Q6IRU2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Gm4768-201ENSMUST00000206199 686 ntBASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Tpm4Q6IRU2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms