Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm14441-201ENSMUST00000121960 540 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm25998-201ENSMUST00000175397 53 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 CT010506.1-201ENSMUST00000223673 349 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Gm14213-201ENSMUST00000119778 768 ntBASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Gm30671-201ENSMUST00000214898 318 ntBASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarca2Q6DIC0 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Gm14395-201ENSMUST00000120494 563 ntBASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Gm9916-201ENSMUST00000192943 1228 ntBASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Arhgef33-210ENSMUST00000225548 456 ntBASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 AC164437.3-201ENSMUST00000228323 347 ntBASIC21.08■□□□□ 0.97
Smarca2Q6DIC0 Gm6655-201ENSMUST00000201932 1309 ntBASIC21.08■□□□□ 0.96
Smarca2Q6DIC0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Smarca2Q6DIC0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smarca2Q6DIC0 Gm18642-201ENSMUST00000206642 1400 ntBASIC21.08■□□□□ 0.96
Smarca2Q6DIC0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Smarca2Q6DIC0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smarca2Q6DIC0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm6630-201ENSMUST00000119199 454 ntBASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm8451-201ENSMUST00000170338 447 ntBASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm37852-201ENSMUST00000193027 350 ntBASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm44124-201ENSMUST00000204159 472 ntBASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm7536-201ENSMUST00000077389 444 ntBASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm5453-201ENSMUST00000080866 447 ntBASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Gm21759-201ENSMUST00000178345 1828 ntBASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarca2Q6DIC0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Gm12791-201ENSMUST00000120788 655 ntBASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Gm7082-201ENSMUST00000209880 969 ntBASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Gm45758-201ENSMUST00000212448 1006 ntBASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 CT573047.1-201ENSMUST00000223652 851 ntBASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 AC130477.1-201ENSMUST00000226982 420 ntBASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Gm10728-201ENSMUST00000194292 1829 ntBASIC21.06■□□□□ 0.96
Smarca2Q6DIC0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms