Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm22323-201ENSMUST00000103832 109 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm13350-201ENSMUST00000120519 479 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm38241-201ENSMUST00000192641 898 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm19189-201ENSMUST00000221689 754 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm25131-201ENSMUST00000082653 151 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.12□□□□□ -0.31
Scube3Q66PY1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scube3Q66PY1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm23270-201ENSMUST00000104055 131 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm12001-201ENSMUST00000121727 913 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm5277-201ENSMUST00000164923 556 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm18056-201ENSMUST00000207670 568 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm18061-201ENSMUST00000208350 562 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm18063-201ENSMUST00000208529 568 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm18052-201ENSMUST00000208750 559 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 AC132433.1-201ENSMUST00000221553 1101 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Scube3Q66PY1 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC13.11□□□□□ -0.31
Scube3Q66PY1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Scube3Q66PY1 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.1□□□□□ -0.31
Scube3Q66PY1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 654.8 ms