Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.65□□□□□ -0.22
Ift88Q61371 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.65□□□□□ -0.22
Ift88Q61371 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Ift88Q61371 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ift88Q61371 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.65□□□□□ -0.22
Ift88Q61371 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ift88Q61371 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ift88Q61371 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ift88Q61371 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ift88Q61371 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.64□□□□□ -0.23
Ift88Q61371 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.64□□□□□ -0.23
Ift88Q61371 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.64□□□□□ -0.23
Ift88Q61371 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.64□□□□□ -0.23
Ift88Q61371 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ift88Q61371 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.64□□□□□ -0.23
Ift88Q61371 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.64□□□□□ -0.23
Ift88Q61371 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.64□□□□□ -0.23
Ift88Q61371 Gm8018-201ENSMUST00000173536 789 ntBASIC13.64□□□□□ -0.23
Ift88Q61371 Gm26927-201ENSMUST00000182385 965 ntBASIC13.64□□□□□ -0.23
Ift88Q61371 Gm18304-201ENSMUST00000189162 546 ntBASIC13.64□□□□□ -0.23
Ift88Q61371 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.64□□□□□ -0.23
Ift88Q61371 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.64□□□□□ -0.23
Ift88Q61371 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ift88Q61371 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ift88Q61371 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ift88Q61371 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Ift88Q61371 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ift88Q61371 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ift88Q61371 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ift88Q61371 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Ift88Q61371 Gm23119-201ENSMUST00000158610 140 ntBASIC13.63□□□□□ -0.23
Ift88Q61371 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Gm27839-201ENSMUST00000184242 106 ntBASIC13.63□□□□□ -0.23
Ift88Q61371 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Gm7561-201ENSMUST00000211203 886 ntBASIC13.63□□□□□ -0.23
Ift88Q61371 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ift88Q61371 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Gm6091-201ENSMUST00000098307 165 ntBASIC13.63□□□□□ -0.23
Ift88Q61371 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Ift88Q61371 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ift88Q61371 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.63□□□□□ -0.23
Ift88Q61371 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift88Q61371 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms