Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Six4Q61321 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Six4Q61321 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Six4Q61321 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Gm14109-201ENSMUST00000118814 309 ntBASIC12.44□□□□□ -0.42
Six4Q61321 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Gm20482-202ENSMUST00000174729 825 ntBASIC12.44□□□□□ -0.42
Six4Q61321 Gm27046-201ENSMUST00000182160 463 ntBASIC12.44□□□□□ -0.42
Six4Q61321 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.44□□□□□ -0.42
Six4Q61321 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six4Q61321 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.44□□□□□ -0.42
Six4Q61321 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Six4Q61321 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Six4Q61321 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Six4Q61321 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Six4Q61321 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.43□□□□□ -0.42
Six4Q61321 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.43□□□□□ -0.42
Six4Q61321 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.43□□□□□ -0.42
Six4Q61321 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.43□□□□□ -0.42
Six4Q61321 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.43□□□□□ -0.42
Six4Q61321 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Six4Q61321 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.43□□□□□ -0.42
Six4Q61321 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six4Q61321 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.43□□□□□ -0.42
Six4Q61321 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.42□□□□□ -0.42
Six4Q61321 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Six4Q61321 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Six4Q61321 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.42□□□□□ -0.42
Six4Q61321 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.42□□□□□ -0.42
Six4Q61321 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six4Q61321 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms