Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm23604-201ENSMUST00000104311 132 ntBASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm14234-201ENSMUST00000119539 845 ntBASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.87□□□□□ -0.51
Col12a1Q60847 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm11996-201ENSMUST00000117538 915 ntBASIC11.87□□□□□ -0.51
Col12a1Q60847 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col12a1Q60847 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col12a1Q60847 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm24279-201ENSMUST00000104236 131 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm14247-201ENSMUST00000120950 237 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm11660-201ENSMUST00000120955 412 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.86□□□□□ -0.51
Col12a1Q60847 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm23105-201ENSMUST00000083719 134 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Col12a1Q60847 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.86□□□□□ -0.51
Col12a1Q60847 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm15707-201ENSMUST00000118804 996 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm9673-201ENSMUST00000119287 781 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.86□□□□□ -0.51
Col12a1Q60847 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col12a1Q60847 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Gm37826-201ENSMUST00000195329 322 ntBASIC11.86□□□□□ -0.51
Col12a1Q60847 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col12a1Q60847 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.85□□□□□ -0.51
Col12a1Q60847 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col12a1Q60847 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.85□□□□□ -0.51
Col12a1Q60847 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.85□□□□□ -0.51
Col12a1Q60847 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col12a1Q60847 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Gm8459-201ENSMUST00000162504 760 ntBASIC11.85□□□□□ -0.51
Col12a1Q60847 Gm8956-201ENSMUST00000203939 825 ntBASIC11.85□□□□□ -0.51
Col12a1Q60847 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col12a1Q60847 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.85□□□□□ -0.51
Col12a1Q60847 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Gm15615-201ENSMUST00000118876 198 ntBASIC11.85□□□□□ -0.51
Col12a1Q60847 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.85□□□□□ -0.51
Col12a1Q60847 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 452.2 ms