Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm11618-201ENSMUST00000117946 267 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm15321-201ENSMUST00000121290 288 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm14719-201ENSMUST00000121891 340 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm22121-201ENSMUST00000175148 54 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm44882-201ENSMUST00000205702 802 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm12341-201ENSMUST00000119724 503 ntBASIC9.59□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms