Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.27□□□□□ -0.92
Trav3-3Q5R1C3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Gm27533-201ENSMUST00000183800 152 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Gm5035-201ENSMUST00000215581 927 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Gm46209-201ENSMUST00000217912 553 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Gm8396-201ENSMUST00000057361 823 ntBASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3-3Q5R1C3 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3-3Q5R1C3 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms