Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.22□□□□□ -0.45
Scn2bQ56A07 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.21□□□□□ -0.45
Scn2bQ56A07 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.21□□□□□ -0.45
Scn2bQ56A07 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.21□□□□□ -0.45
Scn2bQ56A07 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.21□□□□□ -0.45
Scn2bQ56A07 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Gm24526-201ENSMUST00000082921 158 ntBASIC12.21□□□□□ -0.45
Scn2bQ56A07 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn2bQ56A07 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn2bQ56A07 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn2bQ56A07 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.21□□□□□ -0.46
Scn2bQ56A07 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn2bQ56A07 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Scn2bQ56A07 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.2□□□□□ -0.46
Scn2bQ56A07 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.2□□□□□ -0.46
Scn2bQ56A07 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.2□□□□□ -0.46
Scn2bQ56A07 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn2bQ56A07 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.19□□□□□ -0.46
Scn2bQ56A07 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms