Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm11989-201ENSMUST00000117240 672 ntBASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Gm7851-201ENSMUST00000117574 323 ntBASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Gm11362-201ENSMUST00000118838 850 ntBASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Gm9996-201ENSMUST00000070359 913 ntBASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.42□□□□□ -0.1
Ddx49Q4FZF3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Gm25881-201ENSMUST00000157783 103 ntBASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Gm17827-201ENSMUST00000211825 742 ntBASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Gm19994-201ENSMUST00000217086 586 ntBASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx49Q4FZF3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Gm43962-201ENSMUST00000203898 190 ntBASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx49Q4FZF3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ddx49Q4FZF3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.11
Ddx49Q4FZF3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms