Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm14277-201ENSMUST00000121195 360 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm2260-201ENSMUST00000184965 657 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm43138-201ENSMUST00000199123 708 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm45186-201ENSMUST00000206874 478 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm18212-201ENSMUST00000211678 889 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gm11930-201ENSMUST00000117788 190 ntBASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gm15547-201ENSMUST00000122152 333 ntBASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gm27046-201ENSMUST00000182160 463 ntBASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gm38317-201ENSMUST00000195564 343 ntBASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc4Q3TCX3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc4Q3TCX3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc4Q3TCX3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc4Q3TCX3 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.77□□□□□ -0.52
Khdc4Q3TCX3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc4Q3TCX3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Khdc4Q3TCX3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc4Q3TCX3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
Khdc4Q3TCX3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Gm14130-201ENSMUST00000118417 987 ntBASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Gm27341-201ENSMUST00000183570 106 ntBASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Gm38092-201ENSMUST00000195600 653 ntBASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc4Q3TCX3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms