Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Daam2-202ENSMUST00000224595 1926 ntBASIC12.13□□□□□ -0.47
Q3KNL4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3KNL4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3KNL4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q3KNL4 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.13□□□□□ -0.47
Q3KNL4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3KNL4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3KNL4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Q3KNL4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.12□□□□□ -0.47
Q3KNL4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.12□□□□□ -0.47
Q3KNL4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Gm25927-201ENSMUST00000175058 117 ntBASIC12.12□□□□□ -0.47
Q3KNL4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.12□□□□□ -0.47
Q3KNL4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.12□□□□□ -0.47
Q3KNL4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.12□□□□□ -0.47
Q3KNL4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Gm10268-201ENSMUST00000085340 555 ntBASIC12.12□□□□□ -0.47
Q3KNL4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.12□□□□□ -0.47
Q3KNL4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3KNL4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Q3KNL4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.11□□□□□ -0.47
Q3KNL4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Gm12384-201ENSMUST00000119228 919 ntBASIC12.11□□□□□ -0.47
Q3KNL4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Gm7029-201ENSMUST00000173226 450 ntBASIC12.11□□□□□ -0.47
Q3KNL4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.11□□□□□ -0.47
Q3KNL4 Gm38092-201ENSMUST00000195600 653 ntBASIC12.11□□□□□ -0.47
Q3KNL4 Gm5035-201ENSMUST00000215581 927 ntBASIC12.11□□□□□ -0.47
Q3KNL4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Q3KNL4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Q3KNL4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.11□□□□□ -0.47
Q3KNL4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Q3KNL4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Q3KNL4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.11□□□□□ -0.47
Q3KNL4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3KNL4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.1□□□□□ -0.47
Q3KNL4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms