Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.11□□□□□ -0.79
Trim63Q38HM4 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.11□□□□□ -0.79
Trim63Q38HM4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gm27920-201ENSMUST00000183953 96 ntBASIC10.11□□□□□ -0.79
Trim63Q38HM4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.11□□□□□ -0.79
Trim63Q38HM4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.11□□□□□ -0.79
Trim63Q38HM4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gm10764-202ENSMUST00000220397 2335 ntBASIC10.11□□□□□ -0.79
Trim63Q38HM4 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trim63Q38HM4 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm28581-201ENSMUST00000186086 2177 ntBASIC10.1□□□□□ -0.79
Trim63Q38HM4 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 AA619741-201ENSMUST00000195095 646 ntBASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.1□□□□□ -0.79
Trim63Q38HM4 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.1□□□□□ -0.79
Trim63Q38HM4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.1□□□□□ -0.79
Trim63Q38HM4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms