Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm6317-201ENSMUST00000183159 1000 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Mir6396-201ENSMUST00000183603 111 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 AC132833.1-202ENSMUST00000228875 1690 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm12481-201ENSMUST00000102482 297 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm4960-201ENSMUST00000182928 1001 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Nsmce2-203ENSMUST00000227173 1122 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm15476-201ENSMUST00000118247 1191 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm42588-201ENSMUST00000200538 1297 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 AC116596.1-201ENSMUST00000228112 1762 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm8798-201ENSMUST00000211877 1661 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm13777-201ENSMUST00000118208 345 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm5808-201ENSMUST00000178090 357 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Ighv1-8-201ENSMUST00000192236 293 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm42660-201ENSMUST00000197733 947 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm5468-202ENSMUST00000227851 682 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 AC126257.1-201ENSMUST00000213195 1536 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm23899-201ENSMUST00000158112 90 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm30946-201ENSMUST00000198288 724 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 AC102327.1-201ENSMUST00000226389 742 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm10371-202ENSMUST00000228010 1081 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm8174-201ENSMUST00000064353 1001 ntBASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms