Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm14999-201ENSMUST00000121039 624 ntBASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.55□□□□□ -0.4
Ebf1Q07802 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm24845-201ENSMUST00000158034 109 ntBASIC12.55□□□□□ -0.4
Ebf1Q07802 Mir1943-201ENSMUST00000158276 73 ntBASIC12.55□□□□□ -0.4
Ebf1Q07802 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm3508-201ENSMUST00000186012 792 ntBASIC12.55□□□□□ -0.4
Ebf1Q07802 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.55□□□□□ -0.4
Ebf1Q07802 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf1Q07802 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.54□□□□□ -0.4
Ebf1Q07802 AU022133-201ENSMUST00000200601 873 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Gm17812-201ENSMUST00000204935 318 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.54□□□□□ -0.4
Ebf1Q07802 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.54□□□□□ -0.4
Ebf1Q07802 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ebf1Q07802 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ebf1Q07802 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf1Q07802 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ebf1Q07802 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ebf1Q07802 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.53□□□□□ -0.4
Ebf1Q07802 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms