Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col10a1Q05306 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col10a1Q05306 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col10a1Q05306 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col10a1Q05306 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.41□□□□□ -0.58
Col10a1Q05306 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Gm14723-201ENSMUST00000118686 215 ntBASIC11.41□□□□□ -0.58
Col10a1Q05306 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Gm9083-201ENSMUST00000120423 819 ntBASIC11.41□□□□□ -0.58
Col10a1Q05306 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Gm43822-201ENSMUST00000200285 476 ntBASIC11.41□□□□□ -0.58
Col10a1Q05306 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.41□□□□□ -0.58
Col10a1Q05306 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Gm24136-201ENSMUST00000083374 165 ntBASIC11.41□□□□□ -0.58
Col10a1Q05306 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Cog3-203ENSMUST00000227473 4197 ntBASIC11.41□□□□□ -0.58
Col10a1Q05306 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col10a1Q05306 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Col10a1Q05306 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.4□□□□□ -0.58
Col10a1Q05306 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col10a1Q05306 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col10a1Q05306 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col10a1Q05306 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col10a1Q05306 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.4□□□□□ -0.58
Col10a1Q05306 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.4□□□□□ -0.58
Col10a1Q05306 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.4□□□□□ -0.58
Col10a1Q05306 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.4□□□□□ -0.58
Col10a1Q05306 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.4□□□□□ -0.58
Col10a1Q05306 Gm44364-201ENSMUST00000198368 141 ntBASIC11.4□□□□□ -0.58
Col10a1Q05306 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.4□□□□□ -0.58
Col10a1Q05306 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col10a1Q05306 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Col10a1Q05306 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col10a1Q05306 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col10a1Q05306 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.59
Col10a1Q05306 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col10a1Q05306 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col10a1Q05306 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col10a1Q05306 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col10a1Q05306 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col10a1Q05306 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col10a1Q05306 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Col10a1Q05306 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.39□□□□□ -0.59
Col10a1Q05306 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col10a1Q05306 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col10a1Q05306 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col10a1Q05306 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col10a1Q05306 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col10a1Q05306 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col10a1Q05306 Gm11222-201ENSMUST00000119005 738 ntBASIC11.39□□□□□ -0.59
Col10a1Q05306 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms