Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox8Q04886 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox8Q04886 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox8Q04886 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox8Q04886 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sox8Q04886 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.03□□□□□ -0.32
Sox8Q04886 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox8Q04886 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox8Q04886 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox8Q04886 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox8Q04886 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox8Q04886 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sox8Q04886 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Sox8Q04886 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox8Q04886 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.02□□□□□ -0.33
Sox8Q04886 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.02□□□□□ -0.33
Sox8Q04886 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Gm45433-201ENSMUST00000209386 247 ntBASIC13.02□□□□□ -0.33
Sox8Q04886 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.02□□□□□ -0.33
Sox8Q04886 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.02□□□□□ -0.33
Sox8Q04886 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox8Q04886 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.02□□□□□ -0.33
Sox8Q04886 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.02□□□□□ -0.33
Sox8Q04886 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sox8Q04886 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Sox8Q04886 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox8Q04886 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.02□□□□□ -0.33
Sox8Q04886 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox8Q04886 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox8Q04886 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox8Q04886 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox8Q04886 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox8Q04886 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox8Q04886 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox8Q04886 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.01□□□□□ -0.33
Sox8Q04886 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox8Q04886 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Sox8Q04886 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox8Q04886 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.01□□□□□ -0.33
Sox8Q04886 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox8Q04886 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox8Q04886 Gm18827-201ENSMUST00000188341 790 ntBASIC13.01□□□□□ -0.33
Sox8Q04886 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox8Q04886 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.01□□□□□ -0.33
Sox8Q04886 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox8Q04886 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.01□□□□□ -0.33
Sox8Q04886 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.01□□□□□ -0.33
Sox8Q04886 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox8Q04886 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms