Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gabpb1Q00420 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.55□□□□□ -0.4
Gabpb1Q00420 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gabpb1Q00420 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gabpb1Q00420 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gabpb1Q00420 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gabpb1Q00420 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gabpb1Q00420 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gabpb1Q00420 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gabpb1Q00420 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.55□□□□□ -0.4
Gabpb1Q00420 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gabpb1Q00420 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.54□□□□□ -0.4
Gabpb1Q00420 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.54□□□□□ -0.4
Gabpb1Q00420 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.54□□□□□ -0.4
Gabpb1Q00420 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gabpb1Q00420 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gm24830-201ENSMUST00000102024 166 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gm8062-201ENSMUST00000139696 444 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gabpb1Q00420 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gm43133-201ENSMUST00000197472 463 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.53□□□□□ -0.4
Gabpb1Q00420 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gm19309-201ENSMUST00000218295 205 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gm26232-201ENSMUST00000083360 166 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.53□□□□□ -0.4
Gabpb1Q00420 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gabpb1Q00420 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gabpb1Q00420 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gabpb1Q00420 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gabpb1Q00420 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.52□□□□□ -0.4
Gabpb1Q00420 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms