Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm15003-201ENSMUST00000118884 446 ntBASIC17.14■□□□□ 0.33
Xrn1P97789 Gm12783-201ENSMUST00000121425 397 ntBASIC17.14■□□□□ 0.33
Xrn1P97789 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC17.14■□□□□ 0.33
Xrn1P97789 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC17.14■□□□□ 0.33
Xrn1P97789 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC17.14■□□□□ 0.33
Xrn1P97789 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC17.14■□□□□ 0.33
Xrn1P97789 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC17.14■□□□□ 0.33
Xrn1P97789 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.14■□□□□ 0.33
Xrn1P97789 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Xrn1P97789 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Xrn1P97789 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Xrn1P97789 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xrn1P97789 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Xrn1P97789 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Xrn1P97789 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Xrn1P97789 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC17.13■□□□□ 0.33
Xrn1P97789 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC17.13■□□□□ 0.33
Xrn1P97789 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC17.13■□□□□ 0.33
Xrn1P97789 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC17.13■□□□□ 0.33
Xrn1P97789 Gm45500-201ENSMUST00000211676 803 ntBASIC17.13■□□□□ 0.33
Xrn1P97789 CT009527.1-201ENSMUST00000224205 339 ntBASIC17.13■□□□□ 0.33
Xrn1P97789 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Xrn1P97789 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Xrn1P97789 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Gm14274-201ENSMUST00000117182 615 ntBASIC17.13■□□□□ 0.33
Xrn1P97789 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Gm37826-201ENSMUST00000195329 322 ntBASIC17.13■□□□□ 0.33
Xrn1P97789 Gm35713-201ENSMUST00000210516 199 ntBASIC17.13■□□□□ 0.33
Xrn1P97789 AC153962.2-201ENSMUST00000219417 550 ntBASIC17.13■□□□□ 0.33
Xrn1P97789 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xrn1P97789 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Gm44056-201ENSMUST00000204623 1427 ntBASIC17.12■□□□□ 0.33
Xrn1P97789 AC158636.1-201ENSMUST00000220118 1393 ntBASIC17.12■□□□□ 0.33
Xrn1P97789 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Xrn1P97789 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Gm25492-201ENSMUST00000157383 129 ntBASIC17.12■□□□□ 0.33
Xrn1P97789 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC17.12■□□□□ 0.33
Xrn1P97789 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Xrn1P97789 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Xrn1P97789 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Xrn1P97789 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Xrn1P97789 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.12■□□□□ 0.33
Xrn1P97789 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Xrn1P97789 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xrn1P97789 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.11■□□□□ 0.33
Xrn1P97789 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC17.11■□□□□ 0.33
Xrn1P97789 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Xrn1P97789 Gm13019-201ENSMUST00000120000 276 ntBASIC17.11■□□□□ 0.33
Xrn1P97789 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms