Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.72□□□□□ -0.53
Nkx3-2P97503 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.72□□□□□ -0.53
Nkx3-2P97503 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.72□□□□□ -0.53
Nkx3-2P97503 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm13665-201ENSMUST00000120830 528 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 AA914427-201ENSMUST00000193194 1166 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.71□□□□□ -0.53
Nkx3-2P97503 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.71□□□□□ -0.53
Nkx3-2P97503 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Nkx3-2P97503 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx3-2P97503 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx3-2P97503 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx3-2P97503 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx3-2P97503 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx3-2P97503 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx3-2P97503 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
Nkx3-2P97503 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.7□□□□□ -0.54
Nkx3-2P97503 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Gm14109-201ENSMUST00000118814 309 ntBASIC11.7□□□□□ -0.54
Nkx3-2P97503 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Gm16570-201ENSMUST00000161951 436 ntBASIC11.7□□□□□ -0.54
Nkx3-2P97503 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.7□□□□□ -0.54
Nkx3-2P97503 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms