Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.38□□□□□ -0.75
Npas1P97459 Gm27306-201ENSMUST00000183970 107 ntBASIC10.38□□□□□ -0.75
Npas1P97459 Gm27989-201ENSMUST00000184721 107 ntBASIC10.38□□□□□ -0.75
Npas1P97459 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.38□□□□□ -0.75
Npas1P97459 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.38□□□□□ -0.75
Npas1P97459 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.38□□□□□ -0.75
Npas1P97459 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.37□□□□□ -0.75
Npas1P97459 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Npas1P97459 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.37□□□□□ -0.75
Npas1P97459 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.37□□□□□ -0.75
Npas1P97459 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.37□□□□□ -0.75
Npas1P97459 Gm28760-201ENSMUST00000185995 736 ntBASIC10.37□□□□□ -0.75
Npas1P97459 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Npas1P97459 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.37□□□□□ -0.75
Npas1P97459 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Npas1P97459 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.37□□□□□ -0.75
Npas1P97459 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Npas1P97459 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Npas1P97459 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Npas1P97459 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Npas1P97459 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Npas1P97459 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Mir686-201ENSMUST00000102174 109 ntBASIC10.36□□□□□ -0.75
Npas1P97459 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.36□□□□□ -0.75
Npas1P97459 Gm14350-201ENSMUST00000116642 640 ntBASIC10.36□□□□□ -0.75
Npas1P97459 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.36□□□□□ -0.75
Npas1P97459 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.36□□□□□ -0.75
Npas1P97459 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.36□□□□□ -0.75
Npas1P97459 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Npas1P97459 Gm7730-201ENSMUST00000212486 454 ntBASIC10.36□□□□□ -0.75
Npas1P97459 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.36□□□□□ -0.75
Npas1P97459 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms