Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pkp1P97350 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pkp1P97350 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pkp1P97350 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Pkp1P97350 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.41□□□□□ -0.1
Pkp1P97350 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pkp1P97350 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Pkp1P97350 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Pkp1P97350 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pkp1P97350 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pkp1P97350 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Gm14832-201ENSMUST00000121289 322 ntBASIC14.41□□□□□ -0.1
Pkp1P97350 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.41□□□□□ -0.1
Pkp1P97350 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.41□□□□□ -0.1
Pkp1P97350 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Gm27023-201ENSMUST00000182372 285 ntBASIC14.41□□□□□ -0.1
Pkp1P97350 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.41□□□□□ -0.1
Pkp1P97350 Gm28882-201ENSMUST00000185504 314 ntBASIC14.41□□□□□ -0.1
Pkp1P97350 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Pkp1P97350 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Gm7046-201ENSMUST00000221351 977 ntBASIC14.41□□□□□ -0.1
Pkp1P97350 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pkp1P97350 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Pkp1P97350 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkp1P97350 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pkp1P97350 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pkp1P97350 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Gm10434-201ENSMUST00000101158 471 ntBASIC14.4□□□□□ -0.1
Pkp1P97350 Gm15370-201ENSMUST00000117158 253 ntBASIC14.4□□□□□ -0.1
Pkp1P97350 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.4□□□□□ -0.1
Pkp1P97350 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pkp1P97350 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.4□□□□□ -0.1
Pkp1P97350 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Pkp1P97350 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.4□□□□□ -0.1
Pkp1P97350 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pkp1P97350 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pkp1P97350 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pkp1P97350 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pkp1P97350 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Pkp1P97350 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Pkp1P97350 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pkp1P97350 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkp1P97350 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pkp1P97350 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pkp1P97350 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pkp1P97350 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pkp1P97350 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pkp1P97350 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pkp1P97350 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pkp1P97350 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pkp1P97350 Gm24934-201ENSMUST00000103764 111 ntBASIC14.39□□□□□ -0.11
Pkp1P97350 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pkp1P97350 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pkp1P97350 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pkp1P97350 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.39□□□□□ -0.11
Pkp1P97350 Gm27501-201ENSMUST00000183599 107 ntBASIC14.39□□□□□ -0.11
Pkp1P97350 Gm29396-201ENSMUST00000185659 716 ntBASIC14.39□□□□□ -0.11
Pkp1P97350 Gm42627-201ENSMUST00000197347 224 ntBASIC14.39□□□□□ -0.11
Pkp1P97350 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms