Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PrkdcP97313 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PrkdcP97313 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm42840-201ENSMUST00000200303 2251 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm11952-201ENSMUST00000121172 821 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Gm26272-201ENSMUST00000179241 132 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC8.12□□□□□ -1.11
PrkdcP97313 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PrkdcP97313 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm42970-201ENSMUST00000196407 1352 ntBASIC8.11□□□□□ -1.11
PrkdcP97313 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
PrkdcP97313 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm16030-201ENSMUST00000159098 603 ntBASIC8.11□□□□□ -1.11
PrkdcP97313 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm44414-201ENSMUST00000203660 2109 ntBASIC8.11□□□□□ -1.11
PrkdcP97313 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
PrkdcP97313 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm13608-201ENSMUST00000121807 1406 ntBASIC8.11□□□□□ -1.11
PrkdcP97313 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC8.11□□□□□ -1.11
PrkdcP97313 Capsl-202ENSMUST00000226688 739 ntBASIC8.11□□□□□ -1.11
PrkdcP97313 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
PrkdcP97313 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
PrkdcP97313 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PrkdcP97313 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm12345-201ENSMUST00000119288 898 ntBASIC8.11□□□□□ -1.11
PrkdcP97313 Gm5976-201ENSMUST00000180794 996 ntBASIC8.11□□□□□ -1.11
PrkdcP97313 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC8.11□□□□□ -1.11
PrkdcP97313 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PrkdcP97313 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
PrkdcP97313 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC8.1□□□□□ -1.11
PrkdcP97313 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
PrkdcP97313 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
PrkdcP97313 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC8.1□□□□□ -1.11
PrkdcP97313 AC164556.1-201ENSMUST00000221318 751 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 AC154461.1-201ENSMUST00000224207 1005 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
PrkdcP97313 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms