Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.72□□□□□ -0.37
Trim43bP86448 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.72□□□□□ -0.37
Trim43bP86448 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Gm13123-201ENSMUST00000122173 492 ntBASIC12.72□□□□□ -0.37
Trim43bP86448 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.72□□□□□ -0.37
Trim43bP86448 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim43bP86448 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Gm42627-201ENSMUST00000197347 224 ntBASIC12.72□□□□□ -0.37
Trim43bP86448 Gm6013-201ENSMUST00000212264 699 ntBASIC12.72□□□□□ -0.37
Trim43bP86448 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.72□□□□□ -0.37
Trim43bP86448 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim43bP86448 Gm10146-201ENSMUST00000072739 309 ntBASIC12.72□□□□□ -0.37
Trim43bP86448 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim43bP86448 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim43bP86448 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim43bP86448 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43bP86448 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trim43bP86448 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43bP86448 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim43bP86448 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43bP86448 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43bP86448 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim43bP86448 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.71□□□□□ -0.37
Trim43bP86448 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.71□□□□□ -0.37
Trim43bP86448 Gm42599-201ENSMUST00000201308 469 ntBASIC12.71□□□□□ -0.37
Trim43bP86448 Gm4768-201ENSMUST00000206199 686 ntBASIC12.71□□□□□ -0.37
Trim43bP86448 Gm19309-201ENSMUST00000218295 205 ntBASIC12.71□□□□□ -0.37
Trim43bP86448 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43bP86448 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim43bP86448 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43bP86448 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Trim43bP86448 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim43bP86448 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43bP86448 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43bP86448 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43bP86448 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43bP86448 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43bP86448 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trim43bP86448 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim43bP86448 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim43bP86448 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim43bP86448 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms