Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ldb1P70662 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ldb1P70662 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.29□□□□□ -0.44
Ldb1P70662 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.29□□□□□ -0.44
Ldb1P70662 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb1P70662 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.29□□□□□ -0.44
Ldb1P70662 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ldb1P70662 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ldb1P70662 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb1P70662 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ldb1P70662 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb1P70662 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm12742-201ENSMUST00000117326 410 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Gm14999-201ENSMUST00000121039 624 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm23119-201ENSMUST00000158610 140 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm2546-201ENSMUST00000182630 991 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm42937-201ENSMUST00000197360 752 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm10608-202ENSMUST00000213924 676 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.28□□□□□ -0.44
Ldb1P70662 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ldb1P70662 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.28□□□□□ -0.44
Ldb1P70662 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ldb1P70662 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb1P70662 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb1P70662 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Ldb1P70662 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ldb1P70662 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb1P70662 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb1P70662 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ldb1P70662 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb1P70662 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb1P70662 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb1P70662 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb1P70662 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms