Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.6□□□□□ -0.55
Cxcr4P70658 Gm12363-201ENSMUST00000122250 668 ntBASIC11.6□□□□□ -0.55
Cxcr4P70658 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.6□□□□□ -0.55
Cxcr4P70658 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Cxcr4P70658 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.6□□□□□ -0.55
Cxcr4P70658 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcr4P70658 Gm23363-201ENSMUST00000175024 79 ntBASIC11.6□□□□□ -0.55
Cxcr4P70658 Gm22121-201ENSMUST00000175148 54 ntBASIC11.6□□□□□ -0.55
Cxcr4P70658 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcr4P70658 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.6□□□□□ -0.55
Cxcr4P70658 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcr4P70658 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcr4P70658 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cxcr4P70658 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcr4P70658 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cxcr4P70658 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcr4P70658 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Cxcr4P70658 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcr4P70658 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcr4P70658 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Gm25261-201ENSMUST00000157416 134 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.59□□□□□ -0.55
Cxcr4P70658 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cxcr4P70658 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cxcr4P70658 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.59□□□□□ -0.55
Cxcr4P70658 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr4P70658 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.58□□□□□ -0.55
Cxcr4P70658 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Cxcr4P70658 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.58□□□□□ -0.56
Cxcr4P70658 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr4P70658 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr4P70658 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cxcr4P70658 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr4P70658 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.58□□□□□ -0.56
Cxcr4P70658 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr4P70658 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr4P70658 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.58□□□□□ -0.56
Cxcr4P70658 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.58□□□□□ -0.56
Cxcr4P70658 Gm43133-201ENSMUST00000197472 463 ntBASIC11.58□□□□□ -0.56
Cxcr4P70658 Gm8099-201ENSMUST00000200510 742 ntBASIC11.58□□□□□ -0.56
Cxcr4P70658 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr4P70658 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms