Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Shox2P70390 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Shox2P70390 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.18□□□□□ -0.46
Shox2P70390 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.18□□□□□ -0.46
Shox2P70390 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.18□□□□□ -0.46
Shox2P70390 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.18□□□□□ -0.46
Shox2P70390 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Shox2P70390 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Shox2P70390 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Shox2P70390 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shox2P70390 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.17□□□□□ -0.46
Shox2P70390 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Shox2P70390 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shox2P70390 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Gm9522-201ENSMUST00000182394 926 ntBASIC12.17□□□□□ -0.46
Shox2P70390 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shox2P70390 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.17□□□□□ -0.46
Shox2P70390 Gm9063-201ENSMUST00000223299 582 ntBASIC12.17□□□□□ -0.46
Shox2P70390 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Shox2P70390 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shox2P70390 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.17□□□□□ -0.46
Shox2P70390 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.17□□□□□ -0.46
Shox2P70390 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.17□□□□□ -0.46
Shox2P70390 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shox2P70390 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shox2P70390 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Shox2P70390 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.16□□□□□ -0.46
Shox2P70390 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.16□□□□□ -0.46
Shox2P70390 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Gm15371-201ENSMUST00000117057 784 ntBASIC12.16□□□□□ -0.46
Shox2P70390 Gm4995-201ENSMUST00000117247 432 ntBASIC12.16□□□□□ -0.46
Shox2P70390 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.16□□□□□ -0.46
Shox2P70390 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Rmrp-201ENSMUST00000157463 271 ntBASIC12.16□□□□□ -0.46
Shox2P70390 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.16□□□□□ -0.46
Shox2P70390 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.16□□□□□ -0.46
Shox2P70390 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.16□□□□□ -0.46
Shox2P70390 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.16□□□□□ -0.46
Shox2P70390 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Shox2P70390 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms