Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm43962-201ENSMUST00000203898 190 ntBASIC12.65□□□□□ -0.38
Ybx1P62960 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.65□□□□□ -0.38
Ybx1P62960 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.65□□□□□ -0.38
Ybx1P62960 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Ybx1P62960 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ybx1P62960 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ybx1P62960 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.65□□□□□ -0.39
Ybx1P62960 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ybx1P62960 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.64□□□□□ -0.39
Ybx1P62960 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ybx1P62960 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.64□□□□□ -0.39
Ybx1P62960 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ybx1P62960 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.64□□□□□ -0.39
Ybx1P62960 Gm23251-201ENSMUST00000103773 110 ntBASIC12.64□□□□□ -0.39
Ybx1P62960 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.64□□□□□ -0.39
Ybx1P62960 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ybx1P62960 Gm23119-201ENSMUST00000158610 140 ntBASIC12.64□□□□□ -0.39
Ybx1P62960 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Gm37246-201ENSMUST00000192665 835 ntBASIC12.64□□□□□ -0.39
Ybx1P62960 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.64□□□□□ -0.39
Ybx1P62960 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ybx1P62960 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.64□□□□□ -0.39
Ybx1P62960 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.64□□□□□ -0.39
Ybx1P62960 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ybx1P62960 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ybx1P62960 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Gm22133-201ENSMUST00000102082 109 ntBASIC12.63□□□□□ -0.39
Ybx1P62960 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Gm8566-201ENSMUST00000120174 465 ntBASIC12.63□□□□□ -0.39
Ybx1P62960 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.63□□□□□ -0.39
Ybx1P62960 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.63□□□□□ -0.39
Ybx1P62960 Gm8285-201ENSMUST00000208293 759 ntBASIC12.63□□□□□ -0.39
Ybx1P62960 Gm17827-201ENSMUST00000211825 742 ntBASIC12.63□□□□□ -0.39
Ybx1P62960 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.63□□□□□ -0.39
Ybx1P62960 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.63□□□□□ -0.39
Ybx1P62960 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.63□□□□□ -0.39
Ybx1P62960 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.63□□□□□ -0.39
Ybx1P62960 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms