Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Rps28P62858 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rps28P62858 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rps28P62858 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Rps28P62858 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rps28P62858 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rps28P62858 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Rps28P62858 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
Rps28P62858 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rps28P62858 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC7.08□□□□□ -1.28
Rps28P62858 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rps28P62858 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rps28P62858 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Gm37032-201ENSMUST00000194882 2975 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm45124-201ENSMUST00000206723 2755 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 AC159819.3-201ENSMUST00000216940 1837 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm4609-201ENSMUST00000106443 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Gm5138-201ENSMUST00000113842 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm15191-201ENSMUST00000117933 1000 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm13882-201ENSMUST00000120886 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm10481-201ENSMUST00000179228 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm3809-201ENSMUST00000180973 1006 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm2574-201ENSMUST00000181051 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm3200-201ENSMUST00000181493 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm4691-201ENSMUST00000182339 1000 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm8349-201ENSMUST00000182720 1003 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm4575-201ENSMUST00000182991 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC7.07□□□□□ -1.28
Rps28P62858 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Rps28P62858 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Gm5812-201ENSMUST00000061073 957 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm10293-201ENSMUST00000076317 1002 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Gm26035-201ENSMUST00000083065 308 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Gm38336-201ENSMUST00000193040 2549 ntBASIC7.07□□□□□ -1.28
Rps28P62858 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Gm12830-201ENSMUST00000137570 2306 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Rps28P62858 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Rps28P62858 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rps28P62858 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 C6-204ENSMUST00000162585 2876 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Rps28P62858 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Rps28P62858 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC7.06□□□□□ -1.28
Rps28P62858 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Gm43858-201ENSMUST00000199418 1778 ntBASIC7.06□□□□□ -1.28
Rps28P62858 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rps28P62858 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms