Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.34□□□□□ -0.27
Nub1P54729 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.34□□□□□ -0.27
Nub1P54729 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nub1P54729 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Nub1P54729 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.34□□□□□ -0.27
Nub1P54729 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Nub1P54729 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nub1P54729 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.34□□□□□ -0.27
Nub1P54729 Gm18304-201ENSMUST00000189162 546 ntBASIC13.34□□□□□ -0.27
Nub1P54729 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.34□□□□□ -0.27
Nub1P54729 Gm44882-201ENSMUST00000205702 802 ntBASIC13.34□□□□□ -0.27
Nub1P54729 Gm6334-201ENSMUST00000207083 228 ntBASIC13.34□□□□□ -0.27
Nub1P54729 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Gm5950-201ENSMUST00000213337 772 ntBASIC13.34□□□□□ -0.27
Nub1P54729 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.34□□□□□ -0.27
Nub1P54729 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nub1P54729 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nub1P54729 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nub1P54729 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.33□□□□□ -0.28
Nub1P54729 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.33□□□□□ -0.28
Nub1P54729 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Gm11531-201ENSMUST00000117614 555 ntBASIC13.33□□□□□ -0.28
Nub1P54729 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.33□□□□□ -0.28
Nub1P54729 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.33□□□□□ -0.28
Nub1P54729 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Nub1P54729 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Nub1P54729 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.33□□□□□ -0.28
Nub1P54729 Gm28196-201ENSMUST00000187719 640 ntBASIC13.33□□□□□ -0.28
Nub1P54729 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.33□□□□□ -0.28
Nub1P54729 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.33□□□□□ -0.28
Nub1P54729 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.33□□□□□ -0.28
Nub1P54729 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.33□□□□□ -0.28
Nub1P54729 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nub1P54729 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.33□□□□□ -0.28
Nub1P54729 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nub1P54729 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nub1P54729 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Nub1P54729 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.33□□□□□ -0.28
Nub1P54729 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Nub1P54729 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nub1P54729 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.32□□□□□ -0.28
Nub1P54729 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.32□□□□□ -0.28
Nub1P54729 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nub1P54729 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nub1P54729 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nub1P54729 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nub1P54729 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.32□□□□□ -0.28
Nub1P54729 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nub1P54729 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.32□□□□□ -0.28
Nub1P54729 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms