Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Rprl1-201ENSMUST00000158050 327 ntBASIC15.57■□□□□ 0.08
Msh6P54276 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.57■□□□□ 0.08
Msh6P54276 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Gm8343-201ENSMUST00000182705 994 ntBASIC15.57■□□□□ 0.08
Msh6P54276 Gm8100-201ENSMUST00000182906 988 ntBASIC15.57■□□□□ 0.08
Msh6P54276 Gm38210-201ENSMUST00000191944 809 ntBASIC15.57■□□□□ 0.08
Msh6P54276 Gm37905-201ENSMUST00000195310 341 ntBASIC15.57■□□□□ 0.08
Msh6P54276 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
Msh6P54276 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.57■□□□□ 0.08
Msh6P54276 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.57■□□□□ 0.08
Msh6P54276 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Msh6P54276 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.56■□□□□ 0.08
Msh6P54276 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Msh6P54276 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Msh6P54276 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Msh6P54276 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Gm24891-201ENSMUST00000104391 136 ntBASIC15.56■□□□□ 0.08
Msh6P54276 Gm11509-201ENSMUST00000117358 325 ntBASIC15.56■□□□□ 0.08
Msh6P54276 Gm7722-201ENSMUST00000120646 741 ntBASIC15.56■□□□□ 0.08
Msh6P54276 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.56■□□□□ 0.08
Msh6P54276 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Msh6P54276 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.56■□□□□ 0.08
Msh6P54276 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.56■□□□□ 0.08
Msh6P54276 Gm2965-201ENSMUST00000198365 343 ntBASIC15.56■□□□□ 0.08
Msh6P54276 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.56■□□□□ 0.08
Msh6P54276 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.56■□□□□ 0.08
Msh6P54276 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.56■□□□□ 0.08
Msh6P54276 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Msh6P54276 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Msh6P54276 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.56■□□□□ 0.08
Msh6P54276 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.56■□□□□ 0.08
Msh6P54276 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh6P54276 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.55■□□□□ 0.08
Msh6P54276 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Msh6P54276 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Msh6P54276 Gm12795-201ENSMUST00000117594 539 ntBASIC15.55■□□□□ 0.08
Msh6P54276 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.55■□□□□ 0.08
Msh6P54276 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.55■□□□□ 0.08
Msh6P54276 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Msh6P54276 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.55■□□□□ 0.08
Msh6P54276 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Msh6P54276 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.55■□□□□ 0.08
Msh6P54276 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.55■□□□□ 0.08
Msh6P54276 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.55■□□□□ 0.08
Msh6P54276 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.55■□□□□ 0.08
Msh6P54276 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.55■□□□□ 0.08
Msh6P54276 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Msh6P54276 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh6P54276 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Msh6P54276 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms