Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Atxn1P54254 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.3□□□□□ -0.44
Atxn1P54254 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Atxn1P54254 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Atxn1P54254 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Gm23949-201ENSMUST00000104027 127 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Gm14058-201ENSMUST00000116082 735 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Gm15515-201ENSMUST00000117827 822 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Gm13736-201ENSMUST00000119272 253 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.29□□□□□ -0.44
Atxn1P54254 Gm38092-201ENSMUST00000195600 653 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Atxn1P54254 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Atxn1P54254 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Atxn1P54254 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Atxn1P54254 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atxn1P54254 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.29□□□□□ -0.44
Atxn1P54254 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.29□□□□□ -0.44
Atxn1P54254 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.28□□□□□ -0.44
Atxn1P54254 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.28□□□□□ -0.44
Atxn1P54254 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.28□□□□□ -0.44
Atxn1P54254 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.28□□□□□ -0.44
Atxn1P54254 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.28□□□□□ -0.44
Atxn1P54254 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.28□□□□□ -0.44
Atxn1P54254 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Atxn1P54254 Gm45598-202ENSMUST00000210719 986 ntBASIC12.28□□□□□ -0.44
Atxn1P54254 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.28□□□□□ -0.44
Atxn1P54254 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Atxn1P54254 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.28□□□□□ -0.44
Atxn1P54254 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Atxn1P54254 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms