Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SftpbP50405 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SftpbP50405 Gm12490-201ENSMUST00000120255 560 ntBASIC12.63□□□□□ -0.39
SftpbP50405 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.63□□□□□ -0.39
SftpbP50405 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.63□□□□□ -0.39
SftpbP50405 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.63□□□□□ -0.39
SftpbP50405 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.63□□□□□ -0.39
SftpbP50405 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.63□□□□□ -0.39
SftpbP50405 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SftpbP50405 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.63□□□□□ -0.39
SftpbP50405 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SftpbP50405 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.63□□□□□ -0.39
SftpbP50405 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SftpbP50405 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.62□□□□□ -0.39
SftpbP50405 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.62□□□□□ -0.39
SftpbP50405 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SftpbP50405 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.62□□□□□ -0.39
SftpbP50405 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.62□□□□□ -0.39
SftpbP50405 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.62□□□□□ -0.39
SftpbP50405 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.62□□□□□ -0.39
SftpbP50405 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Gm9022-201ENSMUST00000182482 992 ntBASIC12.62□□□□□ -0.39
SftpbP50405 Gm7063-201ENSMUST00000186840 981 ntBASIC12.62□□□□□ -0.39
SftpbP50405 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.62□□□□□ -0.39
SftpbP50405 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SftpbP50405 Gm7561-201ENSMUST00000211203 886 ntBASIC12.62□□□□□ -0.39
SftpbP50405 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.62□□□□□ -0.39
SftpbP50405 Gm5035-201ENSMUST00000215581 927 ntBASIC12.62□□□□□ -0.39
SftpbP50405 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Gm8227-201ENSMUST00000223306 571 ntBASIC12.62□□□□□ -0.39
SftpbP50405 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SftpbP50405 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SftpbP50405 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.62□□□□□ -0.39
SftpbP50405 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpbP50405 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpbP50405 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SftpbP50405 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.61□□□□□ -0.39
SftpbP50405 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.61□□□□□ -0.39
SftpbP50405 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpbP50405 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpbP50405 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpbP50405 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SftpbP50405 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpbP50405 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.61□□□□□ -0.39
SftpbP50405 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.61□□□□□ -0.39
SftpbP50405 Gm12384-201ENSMUST00000119228 919 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms