Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm17070-201ENSMUST00000170463 784 ntBASIC13.62□□□□□ -0.23
Brca1P48754 Gm19587-201ENSMUST00000191395 545 ntBASIC13.62□□□□□ -0.23
Brca1P48754 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.62□□□□□ -0.23
Brca1P48754 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Brca1P48754 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Brca1P48754 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.61□□□□□ -0.23
Brca1P48754 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Brca1P48754 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Brca1P48754 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.61□□□□□ -0.23
Brca1P48754 Gm8574-201ENSMUST00000203207 924 ntBASIC13.61□□□□□ -0.23
Brca1P48754 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.61□□□□□ -0.23
Brca1P48754 Gm5805-201ENSMUST00000072779 456 ntBASIC13.61□□□□□ -0.23
Brca1P48754 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brca1P48754 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.61□□□□□ -0.23
Brca1P48754 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.61□□□□□ -0.23
Brca1P48754 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.61□□□□□ -0.23
Brca1P48754 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brca1P48754 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.6□□□□□ -0.23
Brca1P48754 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Brca1P48754 Gm14892-201ENSMUST00000117636 267 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.6□□□□□ -0.23
Brca1P48754 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.6□□□□□ -0.23
Brca1P48754 Gm25604-201ENSMUST00000158359 133 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm8723-201ENSMUST00000166076 820 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm8701-201ENSMUST00000169259 874 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm6450-201ENSMUST00000200896 574 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm8342-201ENSMUST00000209839 757 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.6□□□□□ -0.23
Brca1P48754 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Brca1P48754 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Brca1P48754 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.6□□□□□ -0.23
Brca1P48754 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.6□□□□□ -0.23
Brca1P48754 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Brca1P48754 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.6□□□□□ -0.23
Brca1P48754 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.6□□□□□ -0.23
Brca1P48754 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Brca1P48754 Gm13019-201ENSMUST00000120000 276 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm28937-201ENSMUST00000185413 695 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm29400-201ENSMUST00000187208 695 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm28662-201ENSMUST00000188446 695 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm28251-201ENSMUST00000188835 695 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Gm37981-201ENSMUST00000194280 535 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms