Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.91□□□□□ -0.5
Tnfsf4P43488 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Gm29649-201ENSMUST00000185649 419 ntBASIC11.91□□□□□ -0.5
Tnfsf4P43488 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.91□□□□□ -0.5
Tnfsf4P43488 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.91□□□□□ -0.5
Tnfsf4P43488 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf4P43488 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm13315-201ENSMUST00000120376 991 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm8018-201ENSMUST00000173536 789 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm9794-201ENSMUST00000202370 423 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm6007-201ENSMUST00000208170 823 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Gm10268-201ENSMUST00000085340 555 ntBASIC11.9□□□□□ -0.5
Tnfsf4P43488 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf4P43488 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfsf4P43488 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfsf4P43488 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfsf4P43488 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfsf4P43488 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms