Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1dP43277 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.44□□□□□ -0.74
Hist1h1dP43277 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1dP43277 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Gm12091-201ENSMUST00000146791 830 ntBASIC10.43□□□□□ -0.74
Hist1h1dP43277 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hist1h1dP43277 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms